Added command 'confirm' (from core) + updated 'core'.
-rw-r--r-- 213 .gitignore
-rw-r--r-- 71 .gitmodules
-rw-r--r-- 66073 Doxyfile
drwxr-xr-x - application
-rwxr-xr-x 139 clear-cache.sh
m--------- - core
drwxr-xr-x - db
drwxr-xr-x - docs
-rwxr-xr-x 600 find-bad-php.sh
lrwxrwxrwx 8 inc -> core/inc
-rw-r--r-- 7149 index.php
-rwxr-xr-x 365 package.sh
-rwxr-xr-x 348 pdepend.sh
-rwxr-xr-x 132 rebuild_doc.sh
drwxr-xr-x - templates
-rwxr-xr-x 648 todo-builder.sh
-rwxr-xr-x 97 update_year.sh